File:Molecular-Dynamics-Simulations-of-the-Bacterial-UraA-H+-Uracil-Symporter-in-Lipid-Bilayers-Reveal-a-pcbi.1004123.s016.ogv

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Molecular-Dynamics-Simulations-of-the-Bacterial-UraA-H+-Uracil-Symporter-in-Lipid-Bilayers-Reveal-a-pcbi.1004123.s016.ogv ‎(Ogg Theora video file, length 1 min 10 s, 528 × 544 pixels, 1.78 Mbps, file size: 14.91 MB)


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Summary

Description
English: Lipid binding to CL binding site 1. MD simulation showing the diffusion of two single CL molecules (green) and a POPG molecule (red) in a lipid bilayer and their binding to the CL site 1 on UraA (shown using the residues R4 and R299). Note that in the video UraA is centered in the bilayer for clarity and a smoothing of the trajectory every 10 frames was performed. In the simulation the protein is free to diffuse.
Date
Source S3 Video from Kalli A, Sansom M, Reithmeier R (2015). "Molecular Dynamics Simulations of the Bacterial UraA H+-Uracil Symporter in Lipid Bilayers Reveal a Closed State and a Selective Interaction with Cardiolipin". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1004123. PMID 25729859. PMC: 4346270.
Author Kalli A, Sansom M, Reithmeier R
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This file was transferred to Wikimedia Commons from PubMed Central by way of the Open Access Media Importer.
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2 March 2015

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Date/TimeThumbnailDimensionsUserComment
current21:39, 18 March 20151 min 10 s, 528 × 544 (14.91 MB)Open Access Media Importer BotAutomatically uploaded media file from Open Access source. Please report problems or suggestions here.

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